Analysis Modules

From this page, you can access tools for interactive, custom analysis of the summary results and individual-level data in the Knowledge Portal. Both this page and the tools offered here are under continuous development, so check back often for updates.


Interactive Manhattan Plot

View genetic associations across the genome for all datasets and phenotypes in the Knowledge Portal.

LD (linkage disequilibrium) clumping may be performed for most datasets. Clumping reduces redundancy in genome-wide association plots by grouping variants into sets according to their LD relationships and displaying only the most significantly associated variant in each set.

Variant Finder

This versatile tool lets you specify multiple search criteria to find genetic variants whose associations meet those criteria.